COVID19 Case Reporting - Local Development build (v0.1.0). See the Directory of published versions
@prefix fhir: <http://hl7.org/fhir/> .
@prefix loinc: <https://loinc.org/rdf/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix sct: <http://snomed.info/id/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
# - resource -------------------------------------------------------------------
a fhir:Bundle ;
fhir:nodeRole fhir:treeRoot ;
fhir:id [ fhir:v "LabResult"] ; #
fhir:type [ fhir:v "transaction"] ; #
fhir:entry ( [
fhir:fullUrl [ fhir:v "Task/LabResultTaskExample"^^xsd:anyURI ] ;
( fhir:resource <Task/LabResultTaskExample> ) ;
fhir:request [
fhir:method [ fhir:v "PUT" ] ;
fhir:url [ fhir:v "Task/LabResultTaskExample"^^xsd:anyURI ] ]
] [
fhir:fullUrl [ fhir:v "DiagnosticReport/Covid19LabResultsDiagnosticReportExample"^^xsd:anyURI ] ;
( fhir:resource <DiagnosticReport/Covid19LabResultsDiagnosticReportExample> ) ;
fhir:request [
fhir:method [ fhir:v "PUT" ] ;
fhir:url [ fhir:v "DiagnosticReport/Covid19LabResultsDiagnosticReportExample"^^xsd:anyURI ] ]
] [
fhir:fullUrl [ fhir:v "Practitioner/PractitionerExample"^^xsd:anyURI ] ;
( fhir:resource <Practitioner/PractitionerExample> ) ;
fhir:request [
fhir:method [ fhir:v "PUT" ] ;
fhir:url [ fhir:v "Practitioner/PractitionerExample"^^xsd:anyURI ] ]
] [
fhir:fullUrl [ fhir:v "Specimen/Covid19SpecimenLabResultExample"^^xsd:anyURI ] ;
( fhir:resource <Specimen/Covid19SpecimenLabResultExample> ) ;
fhir:request [
fhir:method [ fhir:v "PUT" ] ;
fhir:url [ fhir:v "Specimen/Covid19SpecimenLabResultExample"^^xsd:anyURI ] ]
] [
fhir:fullUrl [ fhir:v "Observation/Covid19TestResultExample"^^xsd:anyURI ] ;
( fhir:resource <Observation/Covid19TestResultExample> ) ;
fhir:request [
fhir:method [ fhir:v "PUT" ] ;
fhir:url [ fhir:v "Observation/Covid19TestResultExample"^^xsd:anyURI ] ]
] ) . #
<Task/LabResultTaskExample> a fhir:Task ;
fhir:id [ fhir:v "LabResultTaskExample"] ; #
fhir:meta [
( fhir:profile [
fhir:v "http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-lab-task"^^xsd:anyURI ;
fhir:link <http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-lab-task> ] )
] ; #
fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Task</b><a name=\"LabResultTaskExample\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Task "LabResultTaskExample" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-covid19-lab-task.html\">Lab Task</a></p></div><p><b>identifier</b>: Filler Identifier: ORDER12345</p><p><b>basedOn</b>: <a href=\"ServiceRequest-Covid19ServiceRequestExample.html\">ServiceRequest/Covid19ServiceRequestExample</a></p><p><b>status</b>: completed</p><p><b>intent</b>: order</p><p><b>executionPeriod</b>: ?? --> 2022-07-30</p><p><b>lastModified</b>: 2022-07-30</p><p><b>requester</b>: <a href=\"Organization-Covid19OrganizationExample.html\">Organization/Covid19OrganizationExample</a> "Covid19 Organization"</p><p><b>owner</b>: <a href=\"Organization-Covid19OrganizationExample.html\">Organization/Covid19OrganizationExample</a> "Covid19 Organization"</p><h3>Outputs</h3><table class=\"grid\"><tr><td>-</td><td><b>Type</b></td><td><b>Value[x]</b></td></tr><tr><td>*</td><td>Covid19 Test Result <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-cs-lab-task-output.html\">Lab Result Task Output</a>#Result)</span></td><td><a href=\"#DiagnosticReport_Covid19LabResultsDiagnosticReportExample\">See above (DiagnosticReport/Covid19LabResultsDiagnosticReportExample)</a></td></tr></table></div>"
] ; #
fhir:identifier ( [
fhir:type [
( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ;
fhir:code [ fhir:v "FILL" ] ] ) ] ;
fhir:system [ fhir:v "http://openhie.org/fhir/covid19-casereporting/lab-integration/order-id"^^xsd:anyURI ] ;
fhir:value [ fhir:v "ORDER12345" ]
] ) ; #
fhir:basedOn ( [
fhir:reference [ fhir:v "ServiceRequest/Covid19ServiceRequestExample" ]
] ) ; #
fhir:status [ fhir:v "completed"] ; #
fhir:intent [ fhir:v "order"] ; #
fhir:executionPeriod [
fhir:end [ fhir:v "2022-07-30"^^xsd:date ]
] ; #
fhir:lastModified [ fhir:v "2022-07-30"^^xsd:date] ; #
fhir:requester [
fhir:reference [ fhir:v "Organization/Covid19OrganizationExample" ]
] ; #
fhir:owner [
fhir:reference [ fhir:v "Organization/Covid19OrganizationExample" ]
] ; #
fhir:output ( [
fhir:type [
( fhir:coding [
fhir:system [ fhir:v "http://openhie.org/fhir/covid19-casereporting/CodeSystem/cs-lab-task-output"^^xsd:anyURI ] ;
fhir:code [ fhir:v "Result" ] ] ) ] ;
fhir:value [
a fhir:Reference ;
fhir:reference [ fhir:v "DiagnosticReport/Covid19LabResultsDiagnosticReportExample" ] ]
] ) . #
<DiagnosticReport/Covid19LabResultsDiagnosticReportExample> a fhir:DiagnosticReport ;
fhir:id [ fhir:v "Covid19LabResultsDiagnosticReportExample"] ; #
fhir:meta [
( fhir:profile [
fhir:v "http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-diagnostic-report"^^xsd:anyURI ;
fhir:link <http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-diagnostic-report> ] )
] ; #
fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: DiagnosticReport</b><a name=\"Covid19LabResultsDiagnosticReportExample\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource DiagnosticReport "Covid19LabResultsDiagnosticReportExample" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-covid19-diagnostic-report.html\">Diagnostic Report</a></p></div><p><b>basedOn</b>: <a href=\"ServiceRequest-Covid19ServiceRequestExample.html\">ServiceRequest/Covid19ServiceRequestExample</a></p><p><b>status</b>: final</p><p><b>code</b>: SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#94558-4)</span></p><p><b>subject</b>: <a href=\"Patient-Covid19PatientExample.html\">Patient/Covid19PatientExample</a> " SMITH"</p><p><b>performer</b>: <a href=\"#Practitioner_PractitionerExample\">See above (Practitioner/PractitionerExample)</a></p><p><b>result</b>: <a href=\"#Observation_Covid19TestResultExample\">See above (Observation/Covid19TestResultExample)</a></p><p><b>conclusion</b>: Some conclusion text</p></div>"
] ; #
fhir:basedOn ( [
fhir:reference [ fhir:v "ServiceRequest/Covid19ServiceRequestExample" ]
] ) ; #
fhir:status [ fhir:v "final"] ; #
fhir:code [
( fhir:coding [
a loinc:94558-4 ;
fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
fhir:code [ fhir:v "94558-4" ] ] )
] ; #
fhir:subject [
fhir:reference [ fhir:v "Patient/Covid19PatientExample" ]
] ; #
fhir:performer ( [
fhir:reference [ fhir:v "Practitioner/PractitionerExample" ]
] ) ; #
fhir:result ( [
fhir:reference [ fhir:v "Observation/Covid19TestResultExample" ]
] ) ; #
fhir:conclusion [ fhir:v "Some conclusion text"] . #
<Practitioner/PractitionerExample> a fhir:Practitioner ;
fhir:id [ fhir:v "PractitionerExample"] ; #
fhir:meta [
( fhir:profile [
fhir:v "http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-practitioner"^^xsd:anyURI ;
fhir:link <http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-practitioner> ] )
] ; #
fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Practitioner</b><a name=\"PractitionerExample\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Practitioner "PractitionerExample" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-covid19-practitioner.html\">Practitioner</a></p></div><p><b>name</b>: James Smith </p><p><b>telecom</b>: ph: 27537652509</p></div>"
] ; #
fhir:name ( [
fhir:family [ fhir:v "Smith" ] ;
( fhir:given [ fhir:v "James" ] )
] ) ; #
fhir:telecom ( [
fhir:system [ fhir:v "phone" ] ;
fhir:value [ fhir:v "27537652509" ]
] ) . #
<Specimen/Covid19SpecimenLabResultExample> a fhir:Specimen ;
fhir:id [ fhir:v "Covid19SpecimenLabResultExample"] ; #
fhir:meta [
( fhir:profile [
fhir:v "http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-specimen"^^xsd:anyURI ;
fhir:link <http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-specimen> ] )
] ; #
fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"Covid19SpecimenLabResultExample\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "Covid19SpecimenLabResultExample" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-covid19-specimen.html\">Specimen</a></p></div><p><b>identifier</b>: id: SPECIMEN109191879</p><p><b>type</b>: Nasopharyngeal swab <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#258500001)</span></p><p><b>subject</b>: <a href=\"Patient-Covid19PatientExample.html\">Patient/Covid19PatientExample</a> " SMITH"</p><p><b>receivedTime</b>: 2022-07-28 13:28:17-0500</p><h3>Collections</h3><table class=\"grid\"><tr><td>-</td><td><b>Collected[x]</b></td></tr><tr><td>*</td><td>2022-07-28</td></tr></table><h3>Processings</h3><table class=\"grid\"><tr><td>-</td><td><b>Time[x]</b></td></tr><tr><td>*</td><td>2022-07-28</td></tr></table><p><b>note</b>: additional notes here (By Organization/Covid19OrganizationExample @Feb 7, 2015, 6:28:17 PM)</p></div>"
] ; #
fhir:identifier ( [
fhir:system [ fhir:v "http://openhie.org/fhir/covid19-casereporting/identifier/specimen-id"^^xsd:anyURI ] ;
fhir:value [ fhir:v "SPECIMEN109191879" ]
] ) ; #
fhir:type [
( fhir:coding [
a sct:258500001 ;
fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ;
fhir:code [ fhir:v "258500001" ] ] )
] ; #
fhir:subject [
fhir:reference [ fhir:v "Patient/Covid19PatientExample" ]
] ; #
fhir:receivedTime [ fhir:v "2022-07-28T13:28:17-05:00"^^xsd:dateTime] ; #
fhir:collection [
fhir:collected [ fhir:v "2022-07-28"^^xsd:date ]
] ; #
fhir:processing ( [
fhir:time [ fhir:v "2022-07-28"^^xsd:date ]
] ) ; #
fhir:note ( [
fhir:author [
a fhir:Reference ;
fhir:reference [ fhir:v "Organization/Covid19OrganizationExample" ] ] ;
fhir:time [ fhir:v "2015-02-07T13:28:17-05:00"^^xsd:dateTime ] ;
fhir:text [ fhir:v "additional notes here" ]
] ) . #
<Observation/Covid19TestResultExample> a fhir:Observation ;
fhir:id [ fhir:v "Covid19TestResultExample"] ; #
fhir:meta [
( fhir:profile [
fhir:v "http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-test-results"^^xsd:anyURI ;
fhir:link <http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-test-results> ] )
] ; #
fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"Covid19TestResultExample\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "Covid19TestResultExample" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-covid19-test-results.html\">Lab Results</a></p></div><p><b>status</b>: final</p><p><b>code</b>: SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#94558-4)</span></p><p><b>subject</b>: <a href=\"Patient-Covid19PatientExample.html\">Patient/Covid19PatientExample</a> " SMITH"</p><p><b>encounter</b>: <a href=\"Encounter-Covid19AssessmentEncounterExample.html\">Encounter/Covid19AssessmentEncounterExample</a></p><p><b>effective</b>: 2022-07-28</p><p><b>performer</b>: <a href=\"Organization-Covid19OrganizationExample.html\">Organization/Covid19OrganizationExample</a> "Covid19 Organization"</p><p><b>value</b>: Positive <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#10828004)</span></p></div>"
] ; #
fhir:status [ fhir:v "final"] ; #
fhir:code [
( fhir:coding [
a loinc:94558-4 ;
fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
fhir:code [ fhir:v "94558-4" ] ] )
] ; #
fhir:subject [
fhir:reference [ fhir:v "Patient/Covid19PatientExample" ]
] ; #
fhir:encounter [
fhir:reference [ fhir:v "Encounter/Covid19AssessmentEncounterExample" ]
] ; #
fhir:effective [ fhir:v "2022-07-28"^^xsd:date] ; #
fhir:performer ( [
fhir:reference [ fhir:v "Organization/Covid19OrganizationExample" ]
] ) ; #
fhir:value [
a fhir:CodeableConcept ;
( fhir:coding [
a sct:10828004 ;
fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ;
fhir:code [ fhir:v "10828004" ] ] )
] . #
IG © 2022+ Jembi Health Systems. Package openhie.fhir.covid#0.1.0 based on FHIR 4.0.1. Generated 2023-04-04
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