COVID19 Case Reporting
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: Example Bundle - LabOrder - TTL Representation

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix loinc: <https://loinc.org/rdf/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix sct: <http://snomed.info/id/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:Bundle ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "LabOrder"] ; # 
  fhir:type [ fhir:v "transaction"] ; # 
  fhir:entry ( [
fhir:fullUrl [ fhir:v "Task/LabOrderTaskExample"^^xsd:anyURI ] ;
    ( fhir:resource <Task/LabOrderTaskExample> ) ;
fhir:request [
fhir:method [ fhir:v "PUT" ] ;
fhir:url [ fhir:v "Task/LabOrderTaskExample"^^xsd:anyURI ]     ]
  ] [
fhir:fullUrl [ fhir:v "Organization/Covid19ServiceRequestLocationExample"^^xsd:anyURI ] ;
    ( fhir:resource <Organization/Covid19ServiceRequestLocationExample> ) ;
fhir:request [
fhir:method [ fhir:v "PUT" ] ;
fhir:url [ fhir:v "Organization/Covid19ServiceRequestLocationExample"^^xsd:anyURI ]     ]
  ] [
fhir:fullUrl [ fhir:v "ServiceRequest/Covid19ServiceRequestExample"^^xsd:anyURI ] ;
    ( fhir:resource <ServiceRequest/Covid19ServiceRequestExample> ) ;
fhir:request [
fhir:method [ fhir:v "PUT" ] ;
fhir:url [ fhir:v "ServiceRequest/Covid19ServiceRequestExample"^^xsd:anyURI ]     ]
  ] [
fhir:fullUrl [ fhir:v "Practitioner/PractitionerExample"^^xsd:anyURI ] ;
    ( fhir:resource <Practitioner/PractitionerExample> ) ;
fhir:request [
fhir:method [ fhir:v "PUT" ] ;
fhir:url [ fhir:v "Practitioner/PractitionerExample"^^xsd:anyURI ]     ]
  ] [
fhir:fullUrl [ fhir:v "Specimen/Covid19SpecimenExample"^^xsd:anyURI ] ;
    ( fhir:resource <Specimen/Covid19SpecimenExample> ) ;
fhir:request [
fhir:method [ fhir:v "PUT" ] ;
fhir:url [ fhir:v "Specimen/Covid19SpecimenExample"^^xsd:anyURI ]     ]
  ] ) . # 

<Task/LabOrderTaskExample> a fhir:Task ;
  fhir:id [ fhir:v "LabOrderTaskExample"] ; # 
  fhir:meta [
    ( fhir:profile [
fhir:v "http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-lab-task"^^xsd:anyURI ;
fhir:link <http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-lab-task>     ] )
  ] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Task</b><a name=\"LabOrderTaskExample\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Task &quot;LabOrderTaskExample&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-covid19-lab-task.html\">Lab Task</a></p></div><p><b>identifier</b>: Filler Identifier: ORDER12345</p><p><b>basedOn</b>: <a href=\"#ServiceRequest_Covid19ServiceRequestExample\">See above (ServiceRequest/Covid19ServiceRequestExample)</a></p><p><b>status</b>: requested</p><p><b>intent</b>: order</p><p><b>executionPeriod</b>: 2022-07-28 --&gt; (ongoing)</p><p><b>lastModified</b>: 2022-07-28</p><p><b>requester</b>: <a href=\"Organization-Covid19OrganizationExample.html\">Organization/Covid19OrganizationExample</a> &quot;Covid19 Organization&quot;</p><p><b>owner</b>: <a href=\"Organization-Covid19OrganizationExample.html\">Organization/Covid19OrganizationExample</a> &quot;Covid19 Organization&quot;</p></div>"
  ] ; # 
  fhir:identifier ( [
fhir:type [
      ( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ;
fhir:code [ fhir:v "FILL" ]       ] )     ] ;
fhir:system [ fhir:v "http://openhie.org/fhir/covid19-casereporting/lab-integration/order-id"^^xsd:anyURI ] ;
fhir:value [ fhir:v "ORDER12345" ]
  ] ) ; # 
  fhir:basedOn ( [
fhir:reference [ fhir:v "ServiceRequest/Covid19ServiceRequestExample" ]
  ] ) ; # 
  fhir:status [ fhir:v "requested"] ; # 
  fhir:intent [ fhir:v "order"] ; # 
  fhir:executionPeriod [
fhir:start [ fhir:v "2022-07-28"^^xsd:date ]
  ] ; # 
  fhir:lastModified [ fhir:v "2022-07-28"^^xsd:date] ; # 
  fhir:requester [
fhir:reference [ fhir:v "Organization/Covid19OrganizationExample" ]
  ] ; # 
  fhir:owner [
fhir:reference [ fhir:v "Organization/Covid19OrganizationExample" ]
  ] . # 

<Organization/Covid19ServiceRequestLocationExample> a fhir:Organization ;
  fhir:id [ fhir:v "Covid19ServiceRequestLocationExample"] ; # 
  fhir:meta [
    ( fhir:profile [
fhir:v "http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-service-request-location"^^xsd:anyURI ;
fhir:link <http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-service-request-location>     ] )
  ] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Organization</b><a name=\"Covid19ServiceRequestLocationExample\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Organization &quot;Covid19ServiceRequestLocationExample&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-covid19-service-request-location.html\">Lab Order Request Location</a></p></div><p><b>identifier</b>: Organization identifier: facility2</p><p><b>name</b>: Laboratory Services</p><p><b>address</b>: DISI line 1 DISI line 2 DISI line 3 DISI city 1 DISI state 1 DISI postal code DISI country </p></div>"
  ] ; # 
  fhir:identifier ( [
fhir:type [
      ( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ;
fhir:code [ fhir:v "XX" ]       ] )     ] ;
fhir:system [ fhir:v "http://openhie.org/fhir/covid19-casereporting/identifier/covid19-service-request-location"^^xsd:anyURI ] ;
fhir:value [ fhir:v "facility2" ]
  ] ) ; # 
  fhir:name [ fhir:v "Laboratory Services"] ; # 
  fhir:address ( [
    ( fhir:line [ fhir:v "DISI line 1" ] [ fhir:v "DISI line 2" ] [ fhir:v "DISI line 3" ] ) ;
fhir:city [ fhir:v "DISI city 1" ] ;
fhir:district [ fhir:v "DISI district 1" ] ;
fhir:state [ fhir:v "DISI state 1" ] ;
fhir:postalCode [ fhir:v "DISI postal code" ] ;
fhir:country [ fhir:v "DISI country" ]
  ] ) . # 

<ServiceRequest/Covid19ServiceRequestExample> a fhir:ServiceRequest ;
  fhir:id [ fhir:v "Covid19ServiceRequestExample"] ; # 
  fhir:meta [
    ( fhir:profile [
fhir:v "http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-lab-order"^^xsd:anyURI ;
fhir:link <http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-lab-order>     ] )
  ] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: ServiceRequest</b><a name=\"Covid19ServiceRequestExample\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource ServiceRequest &quot;Covid19ServiceRequestExample&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-covid19-lab-order.html\">Lab Order</a></p></div><p><b>identifier</b>: Placer Identifier: ORDER12345</p><p><b>status</b>: completed</p><p><b>intent</b>: order</p><p><b>doNotPerform</b>: false</p><p><b>code</b>: SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#94558-4)</span></p><p><b>subject</b>: <a href=\"Patient-Covid19PatientExample.html\">Patient/Covid19PatientExample</a> &quot; SMITH&quot;</p><p><b>encounter</b>: <a href=\"Encounter-Covid19AssessmentEncounterExample.html\">Encounter/Covid19AssessmentEncounterExample</a></p><p><b>occurrence</b>: 2012-01-05</p><p><b>requester</b>: <a href=\"#Practitioner_PractitionerExample\">See above (Practitioner/PractitionerExample)</a></p><p><b>performer</b>: <a href=\"#Organization_Covid19ServiceRequestLocationExample\">See above (Organization/Covid19ServiceRequestLocationExample)</a></p><p><b>reasonCode</b>: Equipment error/failure (finding) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#397933008)</span></p><p><b>specimen</b>: <a href=\"#Specimen_Covid19SpecimenExample\">See above (Specimen/Covid19SpecimenExample)</a></p><p><b>note</b>: additional notes here (By Organization/Covid19OrganizationExample @Feb 7, 2015, 6:28:17 PM)</p></div>"
  ] ; # 
  fhir:identifier ( [
fhir:type [
      ( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ;
fhir:code [ fhir:v "PLAC" ]       ] )     ] ;
fhir:system [ fhir:v "http://openhie.org/fhir/covid19-casereporting/identifier/lab-order-identifier"^^xsd:anyURI ] ;
fhir:value [ fhir:v "ORDER12345" ]
  ] ) ; # 
  fhir:status [ fhir:v "completed"] ; # 
  fhir:intent [ fhir:v "order"] ; # 
  fhir:doNotPerform [ fhir:v "false"^^xsd:boolean] ; # 
  fhir:code [
    ( fhir:coding [
a loinc:94558-4 ;
fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
fhir:code [ fhir:v "94558-4" ]     ] )
  ] ; # 
  fhir:subject [
fhir:reference [ fhir:v "Patient/Covid19PatientExample" ]
  ] ; # 
  fhir:encounter [
fhir:reference [ fhir:v "Encounter/Covid19AssessmentEncounterExample" ]
  ] ; # 
  fhir:occurrence [ fhir:v "2012-01-05"^^xsd:date] ; # 
  fhir:requester [
fhir:reference [ fhir:v "Practitioner/PractitionerExample" ]
  ] ; # 
  fhir:performer ( [
fhir:reference [ fhir:v "Organization/Covid19ServiceRequestLocationExample" ]
  ] ) ; # 
  fhir:reasonCode ( [
    ( fhir:coding [
a sct:397933008 ;
fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ;
fhir:code [ fhir:v "397933008" ]     ] )
  ] ) ; # 
  fhir:specimen ( [
fhir:reference [ fhir:v "Specimen/Covid19SpecimenExample" ]
  ] ) ; # 
  fhir:note ( [
fhir:author [
a fhir:Reference ;
fhir:reference [ fhir:v "Organization/Covid19OrganizationExample" ]     ] ;
fhir:time [ fhir:v "2015-02-07T13:28:17-05:00"^^xsd:dateTime ] ;
fhir:text [ fhir:v "additional notes here" ]
  ] ) . # 

<Practitioner/PractitionerExample> a fhir:Practitioner ;
  fhir:id [ fhir:v "PractitionerExample"] ; # 
  fhir:meta [
    ( fhir:profile [
fhir:v "http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-practitioner"^^xsd:anyURI ;
fhir:link <http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-practitioner>     ] )
  ] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Practitioner</b><a name=\"PractitionerExample\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Practitioner &quot;PractitionerExample&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-covid19-practitioner.html\">Practitioner</a></p></div><p><b>name</b>: James Smith </p><p><b>telecom</b>: ph: 27537652509</p></div>"
  ] ; # 
  fhir:name ( [
fhir:family [ fhir:v "Smith" ] ;
    ( fhir:given [ fhir:v "James" ] )
  ] ) ; # 
  fhir:telecom ( [
fhir:system [ fhir:v "phone" ] ;
fhir:value [ fhir:v "27537652509" ]
  ] ) . # 

<Specimen/Covid19SpecimenExample> a fhir:Specimen ;
  fhir:id [ fhir:v "Covid19SpecimenExample"] ; # 
  fhir:meta [
    ( fhir:profile [
fhir:v "http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-specimen"^^xsd:anyURI ;
fhir:link <http://openhie.org/fhir/covid19-casereporting/StructureDefinition/covid19-specimen>     ] )
  ] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"Covid19SpecimenExample\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen &quot;Covid19SpecimenExample&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-covid19-specimen.html\">Specimen</a></p></div><p><b>identifier</b>: Unique Specimen ID: abc123</p><p><b>type</b>: Nasopharyngeal swab <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#258500001)</span></p><p><b>subject</b>: <a href=\"Patient-Covid19PatientExample.html\">Patient/Covid19PatientExample</a> &quot; SMITH&quot;</p><h3>Collections</h3><table class=\"grid\"><tr><td>-</td><td><b>Collected[x]</b></td></tr><tr><td>*</td><td>2022-07-28</td></tr></table><p><b>note</b>: additional notes here (By Organization/Covid19OrganizationExample @Feb 7, 2015, 6:28:17 PM)</p></div>"
  ] ; # 
  fhir:identifier ( [
fhir:type [
      ( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ;
fhir:code [ fhir:v "USID" ]       ] )     ] ;
fhir:system [ fhir:v "http://openhie.org/fhir/covid19-casereporting/identifier/specimen-id"^^xsd:anyURI ] ;
fhir:value [ fhir:v "abc123" ]
  ] ) ; # 
  fhir:type [
    ( fhir:coding [
a sct:258500001 ;
fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ;
fhir:code [ fhir:v "258500001" ]     ] )
  ] ; # 
  fhir:subject [
fhir:reference [ fhir:v "Patient/Covid19PatientExample" ]
  ] ; # 
  fhir:collection [
fhir:collected [ fhir:v "2022-07-28"^^xsd:date ]
  ] ; # 
  fhir:note ( [
fhir:author [
a fhir:Reference ;
fhir:reference [ fhir:v "Organization/Covid19OrganizationExample" ]     ] ;
fhir:time [ fhir:v "2015-02-07T13:28:17-05:00"^^xsd:dateTime ] ;
fhir:text [ fhir:v "additional notes here" ]
  ] ) . #